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GCE-LTER Data Set Summary
Accession:
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PLT-GCEM-1610
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Research Theme:
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Plant Ecology (Monitoring)
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Contributors:
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Steven C. Pennings, Jessica O'Connell, Caroline Reddy, Dontrece Smith, Tim Montgomery, Elise Diehl, John Williams, Adam Sapp
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Title:
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Monthly Vegetation and Invertebrate Population Monitoring near the Georgia Coastal Ecosystems LTER Flux Tower
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Abstract:
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Permanent study plots were established in a Spartina alterniflora-dominated marsh in the vicinity of the Georgia Coastal Ecosystems LTER Flux Tower to provide measurements of plant biomass and invertebrate population density over time for comparison with marsh-atmospheric CO2 exchange. Six replicate plots were randomly placed within each of three height zones of Spartina alterniflora (i.e. short, medium and tall Spartina). Beginning in June 2013, surveys were conducted approximately monthly to determine abundance of Littoraria irrorata, Prokelisia marginata, and grasshoppers in each plot. Plant species, stem density, height, and flowering status were also measured in each of the plots, and biomass was calculated using allometric relationships between plant height, flowering status and mass from plant clipping studies. During these surveys, destructive core sampling was also performed in the proximity of the plots (n = 2 per zone - additional cores collected some months in 2014 and 2016) to measure above and below ground biomass for each Spartina zone. Beginning in February 2016, chlorophyll measurements were taken in the proximity of the plots in each Spartina zone (n = 15 per zone).
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DOI:
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10.6073/pasta/9746c71b35e9f8c544ea12c601c33949
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Key Words:
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belowground biomass, biomass, chlorophyll, cores, flowering, grasshoppers, Littoraria, littoraria irrorata, marshes, plants, Prokelisia, Prokelisia marginata, Spartina, Spartina alterniflora, stem density, stem height
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LTER Core Area:
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Population Studies, Primary Production
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Research Themes:
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GCE2 Q2 - Domain Patterns, GCE3 Area2 - Patterns within the Domain, GCE3 Area3 - Responses to Salinity and Inundation, Plant Ecology, Aquatic Invertebrate Ecology, Terrestrial Insect Ecology |
Study Period:
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11-Jun-2013 to 31-Dec-2022
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Study Sites:
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GCE_Flux -- GCE Flux Tower Marsh, Sapelo Island, Georgia
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Species References:
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Littoraria irrorata,
Prokelisia marginata,
Spartina alterniflora |
Project References:
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End of year biomass, Flux tower monthly vegetation monitoring |
Research Protocols:
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Flux Tower Vegetation Chlorophyll Sampling Protocol (Georgia Coastal Ecosystems LTER)
Flux Tower Monthly Vegetation Monitoring Protocol (Georgia Coastal Ecosystems LTER)
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Publications:
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Jung, Y. and Burd, A.B. 2017. Seasonal changes in above- and below-ground non-structural carbohydrates (NSC) in Spartina alterniflora in a marsh in Georgia, USA. Aquatic Botany. 140:13-22. (DOI: https://doi.org/10.1016/j.aquabot.2017.04.003)
Nahrawi, H.B., Leclerc, M.Y., Pennings, S.C., Zhang, G., Singh, N. and Pahari, R. 2020. Impact of tidal inundation on the net ecosystem exchange in daytime conditions in a salt marsh. Agricultural and Forest Meteorology. 294:108133. (DOI: https://doi.org/10.1016/j.agrformet.2020.108133)
O'Connell, J.L., Mishra, D., Alber, M. and Byrd, K.B. 2021. BERM: A belowground ecosystem resilience model for estimating Spartina alterniflora belowground biomass. New Phytologist. (DOI: 10.1111/nph.17607)
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Downloads:
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Data Table: PLT-GCEM-1610_Animals (Grasshopper, Prokelisia, and Littoraria abundance, 2207 records)
Access: Public (released 01-Jan-2017)
Metadata: Text (ESA FLED),
XML (Ecological Metadata Language)
Data Formats: Spreadsheet (CSV) [114.61kb], Text File [105.54kb], MATLAB (GCE Toolbox) [46.17kb], MATLAB (Variables) [36.78kb], Text Report [141.85kb]
Column List:(display)
Column |
Name |
Units |
Type |
Description |
1 |
Date |
YYYY-MM-DD |
string |
Date of survey |
2 |
Spartina_Zone |
none |
string |
Spartina Zone (S = Short Spartina, M = Medium Spartina, T = Tall Spartina) |
3 |
Plot_Number |
none |
integer |
Nominal plot number |
4 |
Latitude |
degrees |
floating-point |
Latitude at center of plot |
5 |
Longitude |
degrees |
floating-point |
Longitude at center of plot |
6 |
Grasshopper_Abundance_Index |
none |
integer |
Grasshopper abundance estimated for 2m x 2m area around quadrat |
7 |
Prokelisia_Abundance_Index |
none |
integer |
Prokelisia abundance estimated in each 0.5m x 0.5m plot |
8 |
Littoraria_Count |
none |
integer |
All visible (>5mm) snails in quadrat |
9 |
Littoraria_Quadrat_Area |
cm^2 |
floating-point |
Areal measurement of quadrat frame for Littoraria count |
10 |
Flag_Littoraria_Quadrat_Area |
none |
string |
QA/QC flags for Areal measurement of quadrat frame for Littoraria count (flagging criteria, where "x" is Littoraria_Quadrat_Area: x<625="Q", (x>2500 & & x<>3025)="Q", x==3025="C") |
Data Table: PLT-GCEM-1610_Biomass (Above and below ground biomass, 669 records)
Access: Public (released 01-Jan-2017)
Metadata: Text (ESA FLED),
XML (Ecological Metadata Language)
Data Formats: Spreadsheet (CSV) [54.20kb], Text File [45.42kb], MATLAB (GCE Toolbox) [56.88kb], MATLAB (Variables) [49.17kb], Text Report [78.91kb]
Column List:(display)
Column |
Name |
Units |
Type |
Description |
1 |
Date |
YYYY-MM-DD |
string |
Date of sample collection |
2 |
Spartina_Zone |
none |
string |
Spartina Zone (S = Short Spartina, M = Medium Spartina, T = Tall Spartina) |
3 |
Replicate |
none |
integer |
Sample replicate number |
4 |
Biomass_Aboveground_Green |
grams |
floating-point |
Green above-ground biomass |
5 |
Flag_Biomass_Aboveground_Green |
none |
string |
QA/QC flags for Green above-ground biomass (flagging criteria, where "x" is Biomass_Aboveground_Green: x<0="I") |
6 |
Biomass_Aboveground_Brown |
grams |
floating-point |
Brown above-ground biomass |
7 |
Flag_Biomass_Aboveground_Brown |
none |
string |
QA/QC flags for Brown above-ground biomass (flagging criteria, where "x" is Biomass_Aboveground_Brown: x<0="I") |
8 |
Biomass_Aboveground_Total |
grams |
floating-point |
Total above-ground biomass |
9 |
Flag_Biomass_Aboveground_Total |
none |
string |
QA/QC flags for Total above-ground biomass (flagging criteria, where "x" is Biomass_Aboveground_Total: x<0="I") |
10 |
Biomass_Belowground_0to10cm |
grams |
floating-point |
Below-ground biomass from 0-10 cm core depth |
11 |
Flag_Biomass_Belowground_0to10cm |
none |
string |
QA/QC flags for Below-ground biomass from 0-10 cm core depth (flagging criteria, where "x" is Biomass_Belowground_0to10cm: x<0="I", strcmp(Date, "2019-11-01")="V", strcmp(Date, "2020-10-28")="V") |
12 |
Biomass_Belowground_10to30cm |
grams |
floating-point |
Below-ground biomass from 10-30 cm core depth |
13 |
Flag_Biomass_Belowground_10to30cm |
none |
string |
QA/QC flags for Below-ground biomass from 10-30 cm core depth (flagging criteria, where "x" is Biomass_Belowground_10to30cm: x<0="I", strcmp(Date, "2019-11-01")="V", strcmp(Date, "2020-10-28")="V") |
14 |
Biomass_Belowground_Total |
grams |
floating-point |
Biomass_Belowground_Total |
15 |
Flag_Biomass_Belowground_Total |
none |
string |
QA/QC flags for Biomass_Belowground_Total (flagging criteria, where "x" is Biomass_Belowground_Total: ) |
16 |
Rhizomes_0to10cm |
grams |
floating-point |
Weight of rhizomes from 0-10 cm core depth |
17 |
Flag_Rhizomes_0to10cm |
none |
string |
QA/QC flags for Weight of rhizomes from 0-10 cm core depth (flagging criteria, where "x" is Rhizomes_0to10cm: strcmp(Date, "2019-11-01")="V", strcmp(Date, "2020-10-28")="V") |
18 |
Rhizomes_10to30cm |
grams |
floating-point |
Weight of rhizomes from 10-30 cm core depth |
19 |
Flag_Rhizomes_10to30cm |
none |
string |
QA/QC flags for Weight of rhizomes from 10-30 cm core depth (flagging criteria, where "x" is Rhizomes_10to30cm: strcmp(Date, "2019-11-01")="V", strcmp(Date, "2020-10-28")="V") |
20 |
Root_to_Shoot_Ratio |
none |
floating-point |
Root to shoot ratio (total below-ground / total above-ground) |
21 |
Flag_Root_to_Shoot_Ratio |
none |
string |
QA/QC flags for Root to shoot ratio (total below-ground / total above-ground) (flagging criteria, where "x" is Root_to_Shoot_Ratio: ) |
Data Table: PLT-GCEM-1610_Chlorophyll (Chlorophyll measurements, 3645 records)
Access: Public (released 01-Jan-2017)
Metadata: Text (ESA FLED),
XML (Ecological Metadata Language)
Data Formats: Spreadsheet (CSV) [111.19kb], Text File [89.50kb], MATLAB (GCE Toolbox) [54.80kb], MATLAB (Variables) [45.31kb], Text Report [130.68kb]
Column List:(display)
Column |
Name |
Units |
Type |
Description |
1 |
Date |
YYYY-MM-DD |
string |
Date of survey |
2 |
Spartina_Zone |
none |
string |
Spartina Zone (S = Short Spartina, M = Medium Spartina, T = Tall Spartina) |
3 |
Sample_Number |
none |
integer |
Ordinal Sample Replicate |
4 |
Chlorophyll_Reading |
CCI |
floating-point |
Chlorophyll content index measurement |
5 |
Flag_Chlorophyll_Reading |
none |
string |
QA/QC flags for Chlorophyll content index measurement (flagging criteria, where "x" is Chlorophyll_Reading: x<0="I", x<1="Q", x>75="Q") |
6 |
Leaf_Color |
none |
string |
Color of leaf recorded if Chlorophyll Reading is less than 10 or greater than 45 |
Zip archive (ancillary data): PLT-GCEM-1610_FieldDataSheets (Zip archive of scanned field data sheets)
Access: Public (released 01-Jan-2017)
Metadata: XML (Ecological Metadata Language)
Data Formats: Zip archive [210778kb]
Zip archive (ancillary data): PLT-GCEM-1610_PlotPhotos (Zip archive containing photographs of the vegetation plots)
Access: Public (released 01-Jan-2017)
Metadata: XML (Ecological Metadata Language)
Data Formats: Zip archive [866290kb]
Data Table: PLT-GCEM-1610_StemHeight (Measured stem heights of plants collected in the biomass cores, 796 records)
Access: Public (released 01-Jan-2017)
Metadata: Text (ESA FLED),
XML (Ecological Metadata Language)
Data Formats: Spreadsheet (CSV) [18.15kb], Text File [16.25kb], MATLAB (GCE Toolbox) [28.64kb], MATLAB (Variables) [30.90kb], Text Report [42.68kb]
Column List:(display)
Column |
Name |
Units |
Type |
Description |
1 |
Date |
YYYY-MM-DD |
string |
Date of survey |
2 |
Spartina_Zone |
none |
string |
Spartina Zone (S = Short Spartina, M = Medium Spartina, T = Tall Spartina) |
3 |
Core_Number |
none |
integer |
Replicate number of core sample |
4 |
Stem_Number |
none |
integer |
Nominal count of stem in core sample |
5 |
Stem_Height |
cm |
floating-point |
Height of individual plant |
Data Table: PLT-GCEM-1610_Vegetation (Stem height and flowering status, 41445 records)
Access: Public (released 01-Jan-2017)
Metadata: Text (ESA FLED),
XML (Ecological Metadata Language)
Data Formats: Spreadsheet (CSV) [3199.71kb], Text File [2875.46kb], MATLAB (GCE Toolbox) [219.12kb], MATLAB (Variables) [209.81kb], Text Report [3134.31kb]
Column List:(display)
Column |
Name |
Units |
Type |
Description |
1 |
Date |
YYYY-MM-DD |
string |
Date of survey |
2 |
Spartina_Zone |
none |
string |
Spartina Zone (S = Short Spartina, M = Medium Spartina, T = Tall Spartina) |
3 |
Plot_Number |
none |
integer |
Nominal plot number |
4 |
Latitude |
degrees |
floating-point |
Latitude at center of plot |
5 |
Longitude |
degrees |
floating-point |
Longitude at center of plot |
6 |
Quadrat_Area |
cm^2 |
floating-point |
Areal measurement of quadrat frame |
7 |
Flag_Quadrat_Area |
none |
string |
QA/QC flags for Areal measurement of quadrat frame (flagging criteria, where "x" is Quadrat_Area: x<625="Q", (x>2500 & & x<>3025)="Q", x==3025="C") |
8 |
Plant_Species |
none |
string |
Species of plant measured |
9 |
Plant_Height |
cm |
floating-point |
Height of individual plant |
10 |
Flag_Plant_Height |
none |
string |
QA/QC flags for Height of individual plant (flagging criteria, where "x" is Plant_Height: x<0="I", strcmp(Spartina_Zone, "M") & Plant_Height>150="Q", strcmp(Spartina_Zone, "S") & Plant_Height>100="Q", strcmp(Spartina_Zone, "T") & Plant_Height>200="Q") |
11 |
Flowering_Status |
none |
integer |
Flowering status of individual plant (0 = not flowering, 1 = flowering) |
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Statistics:
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Generate script code to retrieve data tables for analysis in: MATLAB, R, SAS, SPSS |
Citation:
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Pennings, Steven C. 2016. Monthly Vegetation and Invertebrate Population Monitoring near the Georgia Coastal Ecosystems LTER Flux Tower. Georgia Coastal Ecosystems LTER Project, University of Georgia, Long Term Ecological Research Network. http://dx.doi.org/10.6073/pasta/9746c71b35e9f8c544ea12c601c33949
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